If you’ve ever dreamed of sinking your fork into a cheesecake that’s light as air, fluffy, and as smooth as a cloud, then these Fluffy Japanese Cotton Cheesecake Cupcakes are about to make all your dessert dreams come true. Imagine a cheesecake that feels more like a sponge cake—soft, airy, and melt-in-your-mouth delicious. These cupcakes bring together the best of both worlds: the creamy richness of cheesecake with the delicate fluffiness of a soufflé.
Baked with love and a little magic, these cupcakes are a delightful treat that will surprise your taste buds with their heavenly texture. Whether you’re preparing for a cozy afternoon tea, or you just want to make your family smile, these Japanese Cotton Cheesecake Cupcakes are sure to impress. Trust me, once you take that first bite, you’ll be hooked on how light and creamy they are. Let’s dive into the recipe!
Why You’ll Love Fluffy Japanese Cotton Cheesecake Cupcakes
Melt-in-Your-Mouth Texture
These cupcakes are light, airy, and incredibly soft. The texture is like a cross between a cloud and a sponge cake, giving you the perfect melt-in-your-mouth experience with each bite.
Perfectly Sweet
They strike the ideal balance between sweetness and tang from the cream cheese. These cupcakes aren’t overwhelming, just enough sweetness to make you crave more without feeling too heavy.
Perfect for Any Occasion
Whether it’s for a cozy afternoon snack, a gathering with friends, or a special celebration, these Japanese Cotton Cheesecake Cupcakes are guaranteed to be the star of the show. Their delicate look makes them feel fancy, but they’re surprisingly simple to make.
Simple Ingredients, Gorgeous Results
Despite the fluffy texture, this recipe is straightforward. With just a few simple ingredients—most of which you likely already have in your pantry—you can create a bakery-worthy treat at home!

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Ingredients
Here’s what you’ll need to make these soft, fluffy cupcakes:
- Cream Cheese: The base of the cheesecake filling. Use full-fat cream cheese for the best, smoothest texture.
- Butter: Adds richness to the cupcakes, helping them remain moist and tender.
- Whole Milk: For the perfect creamy texture and to ensure that the batter comes together smoothly.
- Eggs: You’ll need both egg yolks and egg whites. The yolks provide richness, while the whipped egg whites help make the cupcakes fluffy.
- Granulated Sugar: This is the sweetener that balances the tang of the cream cheese and adds structure to the cupcakes.
- Cake Flour: This gives the cupcakes their soft, light texture. It’s a must for achieving the airy quality that’s characteristic of Japanese cotton cheesecakes.
- Lemon Juice: Adds a hint of citrusy brightness to balance out the richness of the cream cheese.
- Vanilla Extract: For that signature warm, aromatic flavor that complements the cheesecake filling.
(Note: Full ingredient measurements are provided in the recipe card below.)
Instructions
Ready to make these melt-in-your-mouth cheesecake cupcakes? Let’s go!
Step 1: Prepare Your Oven and Cupcake Liners
Preheat your oven to 320°F (160°C) and line a 12-cup muffin tin with cupcake liners. You can also lightly grease the liners for easier removal after baking.
Step 2: Prepare the Cream Cheese Mixture
In a medium saucepan, melt the butter and cream cheese over low heat, stirring occasionally until smooth and combined. Once melted, remove the mixture from the heat and let it cool for a few minutes. Add the whole milk, lemon juice, and vanilla extract, and whisk until smooth.
Step 3: Mix in the Dry Ingredients
Sift the cake flour into the cream cheese mixture and whisk until fully incorporated. Be sure to sift the flour to avoid any lumps that could interfere with the batter’s light texture.
Step 4: Add the Egg Yolks
Add the egg yolks one at a time, whisking well after each addition to make sure they’re fully incorporated into the batter. Once the yolks are combined, set the mixture aside.
Step 5: Whip the Egg Whites
In a separate bowl, beat the egg whites with an electric mixer until soft peaks form. Gradually add the granulated sugar and continue beating until stiff peaks form. The egg whites should be firm and glossy, but not dry.
Step 6: Fold in the Egg Whites
Gently fold the whipped egg whites into the cream cheese mixture, working in batches. Be gentle to preserve the airiness of the egg whites, which will help the cupcakes rise and stay fluffy.
Step 7: Bake the Cupcakes
Pour the batter into the prepared cupcake liners, filling each about 3/4 full. Tap the tin lightly on the counter to remove any air bubbles, then place it in the oven. Bake for 20-25 minutes, or until the tops of the cupcakes are golden brown and a toothpick inserted into the center comes out clean.
Step 8: Cool and Serve
Allow the cupcakes to cool in the tin for a few minutes before transferring them to a wire rack to cool completely. These cupcakes are best served at room temperature or chilled.
Nutrition Facts
Servings: 12
Calories per serving: 180
Total Fat: 12g
- Saturated Fat: 7g
- Trans Fat: 0g
Cholesterol: 70mg
Sodium: 70mg
Total Carbohydrates: 17g - Dietary Fiber: 0g
- Sugars: 13g
Protein: 3g
Vitamin A: 8%
Vitamin C: 2%
Calcium: 4%
Iron: 4%
Preparation Time
Prep Time: 15 minutes
Cook Time: 20-25 minutes
Total Time: 40-45 minutes
How to Serve Fluffy Japanese Cotton Cheesecake Cupcakes
Light Dessert
These cupcakes make for an absolutely delightful light dessert after dinner. They’re light enough not to feel heavy, but still rich enough to satisfy your sweet tooth.
Afternoon Tea Treats
Serve these cupcakes alongside a cup of your favorite tea. Their fluffy texture and creamy filling make them the perfect snack for a relaxing afternoon.
At a Party or Gathering
These cupcakes make a stunning addition to any dessert spread. Their delicate flavor and appearance will definitely have your guests coming back for more.
With Fresh Berries
Serve the cupcakes with fresh berries like strawberries, raspberries, or blueberries on top for an extra burst of flavor and color.
Additional Tips
How to Store
Store these Japanese Cotton Cheesecake Cupcakes in an airtight container at room temperature for up to 2-3 days. They can also be refrigerated for a slightly firmer texture.
Can I Use Other Cheese?
While traditional cream cheese is the best choice for its smooth texture and rich flavor, you can experiment with a little bit of mascarpone for a richer, softer filling. Just remember that the flavor will be a bit different.
How Do I Prevent Cracking?
To ensure these cupcakes don’t crack, avoid opening the oven door while baking. If you want to be extra careful, you can place a small pan of water at the bottom of the oven to create a steam environment, which helps the cupcakes bake evenly.
Can I Make a Large Cake Instead of Cupcakes?
Yes! You can use this recipe to make a Japanese Cotton Cheesecake cake instead of cupcakes. Use an 8-inch round cake pan and bake for 45-50 minutes or until golden on top.
FAQ Section
Q1: Can I freeze these cupcakes?
A1: Yes, these cupcakes freeze beautifully! Just wrap them tightly in plastic wrap or place them in an airtight container, and they’ll keep in the freezer for up to 2 weeks. Let them thaw at room temperature before serving.
Q2: What if I don’t have cake flour?
A2: If you don’t have cake flour, you can substitute it with a combination of all-purpose flour and cornstarch. For every cup of cake flour, use 1 cup minus 2 tablespoons of all-purpose flour and add 2 tablespoons of cornstarch.
Q3: Can I add different flavors to the cupcakes?
A3: Absolutely! You can try adding a splash of lemon zest for a citrusy twist or a little matcha powder for a unique flavor. Just make sure to adjust the amount of sugar to balance out the flavor.
Q4: How can I tell when the cupcakes are done baking?
A4: The cupcakes should be lightly golden on top, and a toothpick inserted into the center should come out clean or with just a few moist crumbs attached.
Q5: How do I prevent the cupcakes from deflating after baking?
A5: Allow the cupcakes to cool in the pan for a few minutes before transferring them to a wire rack. Rapid temperature changes can cause them to deflate, so cooling them gradually is key.
Q6: Can I double the recipe?
A6: Yes, you can double the recipe! Just be sure to adjust the baking time accordingly. Use a larger pan for a cake-sized version or multiple muffin tins for cupcakes.
Q7: Can I make this without an electric mixer?
A7: While it’s easier with an electric mixer, you can use a hand whisk to beat the egg whites by hand. Just make sure you have a little extra arm power to get them to stiff peaks!
Q8: How can I make these cupcakes gluten-free?
A8: You can use a gluten-free cake flour blend to make these cupcakes gluten-free. Make sure to check the texture as you go, as gluten-free flours can behave differently.
Q9: Can I add frosting to these cupcakes?
A9: These cupcakes are light enough to stand on their own, but if you want to add a little extra sweetness, a light whipped cream frosting would pair beautifully.
Q10: What’s the best way to serve them?
A10: These cupcakes are best served at room temperature or chilled. You can top them with whipped cream or fresh berries for an extra special touch!
Conclusion
These Fluffy Japanese Cotton Cheesecake Cupcakes are the perfect treat for anyone who loves the smooth, creamy goodness of cheesecake but wants something light and airy. With their delicate texture, they melt in your mouth, making every bite a pure indulgence. Whether you’re serving them for a special occasion or just because you deserve something sweet, these cupcakes are sure to impress. They’re simple to make, require just a few ingredients, and the result is absolutely stunning!
So go ahead, give this recipe a try and watch your loved ones marvel at your baking skills. Trust me, once you take a bite, you’ll be hooked on the soft, fluffy magic of these cupcakes. Don’t forget to serve them with a smile and enjoy every moment of the sweet goodness. Happy baking!
Print
Fluffy Japanese Cotton Cheesecake Cupcakes
- Total Time: 45 minutes
- Yield: 12 servings 1x
Description
These Fluffy Japanese Cotton Cheesecake Cupcakes are a lighter, airier version of the traditional cheesecake. With a delicate, jiggly texture and just the right amount of sweetness, these cupcakes offer all the deliciousness of a cheesecake but in a bite-sized, fluffy form. Perfect for a dessert that’s both indulgent and light! Enjoy these airy treats with a cup of tea or coffee for a delightful snack.
Ingredients
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8 oz cream cheese, softened
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1/4 cup unsalted butter, softened
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1/2 cup whole milk
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1/2 cup granulated sugar
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4 large eggs, separated (you’ll use both the yolks and whites)
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1 tablespoon lemon juice (optional, for added tanginess)
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1/2 cup all-purpose flour
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1/4 cup cornstarch
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1/4 teaspoon salt
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1 teaspoon vanilla extract
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Powdered sugar, for dusting (optional)
Instructions
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Preheat Oven:
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Preheat your oven to 320°F (160°C). Line a 12-cup muffin tin with cupcake liners or grease and flour the cups.
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Prepare the Cream Cheese Mixture:
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In a medium saucepan, combine the cream cheese, butter, and whole milk.
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Heat over low to medium heat, stirring occasionally, until the cream cheese and butter are completely melted and smooth. Remove from the heat and let it cool to room temperature.
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Mix Dry Ingredients:
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In a separate bowl, whisk together the all-purpose flour, cornstarch, and salt. Set aside.
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Egg Yolks:
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In a large bowl, whisk together the egg yolks, granulated sugar, and lemon juice (if using) until the mixture is smooth and pale.
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Slowly pour in the cooled cream cheese mixture, whisking continuously to combine.
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Add Dry Ingredients:
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Gradually sift in the flour mixture into the egg yolk mixture, mixing gently until fully combined. Set the batter aside.
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Whip Egg Whites:
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In a separate, clean bowl, beat the egg whites with a handheld mixer or stand mixer on medium-high speed until soft peaks form.
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Gradually add 2 tablespoons of granulated sugar and continue to beat until stiff peaks form (the egg whites should stand up firmly when the beaters are lifted).
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Combine the Mixtures:
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Gently fold a third of the whipped egg whites into the batter to lighten it, using a spatula and careful folding motions.
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Once the mixture is lightened, fold in the remaining egg whites, being careful not to deflate the batter.
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Bake:
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Pour the batter evenly into the prepared muffin cups, filling each about 3/4 of the way full.
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Tap the muffin tin gently on the counter to release any air bubbles.
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Place the muffin tin into the oven and bake for 20-25 minutes, or until the tops are golden brown and slightly puffed.
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Note: The cupcakes will continue to rise and may collapse slightly as they cool, which is normal for Japanese cotton cheesecakes.
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Cool:
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Allow the cupcakes to cool in the tin for 5 minutes before transferring them to a wire rack to cool completely.
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The cupcakes will shrink a bit as they cool, but they should remain soft and fluffy.
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Serve:
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Once cooled, dust the tops with powdered sugar if desired, and serve. These cupcakes are best enjoyed the same day but can be stored in an airtight container in the refrigerator for up to 2-3 days.
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Notes
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Be sure to fold the whipped egg whites into the batter gently to avoid deflating the fluffy texture.
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These cupcakes can be served as is or with fresh berries, whipped cream, or a drizzle of fruit sauce for extra flavor.
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You can also add a bit of lemon zest or vanilla extract to the batter for extra flavor.
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If you don’t have cornstarch, you can substitute it with an equal amount of flour.
- Prep Time: 20 minutes
- Cook Time: 25 minutes
- Category: Dessert
- Method: Baking
- Cuisine: Japanese
Nutrition
- Serving Size: 1 cupcake
- Calories: 200
- Sugar: 16g
- Sodium: 100mg
- Fat: 14g
- Saturated Fat: 8g
- Unsaturated Fat: 6g
- Trans Fat: 0g
- Carbohydrates: 17g
- Fiber: 1g
- Protein: 4g
- Cholesterol: 90mg